Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_108183 | Not Available | Positive | 3804097 - 3804300 | 7159.55 |
| transcriptional regulator, lysr family | SAMN06295900_108184 | Not Available | Negative | 3804297 - 3805211 | 33517.6 |
| regulatory protein, luxr family | SAMN06295900_108185 | Not Available | Positive | 3805301 - 3805861 | 20348.1 |
| hypothetical protein | SAMN06295900_108186 | Not Available | Negative | 3806158 - 3806853 | 24935.1 |
| predicted oxidoreductase | SAMN06295900_108187 | Not Available | Negative | 3807025 - 3808050 | 37706.8 |
| pld-like domain-containing protein | SAMN06295900_108188 | Not Available | Negative | 3808217 - 3809989 | 64781.2 |
| helix-turn-helix domain-containing protein | SAMN06295900_108189 | Not Available | Positive | 3810067 - 3810666 | 22032.6 |
| hipa n-terminal domain-containing protein | SAMN06295900_108190 | Not Available | Positive | 3810681 - 3811967 | 46882.0 |
| transcriptional regulator, iclr family | SAMN06295900_108191 | Not Available | Negative | 3811980 - 3812876 | 32876.3 |
| 2-deoxy-d-gluconate 3-dehydrogenase | SAMN06295900_108192 | Not Available | Negative | 3812905 - 3813666 | 26434.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.