Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295900_108173 | Not Available | Positive | 3792371 - 3793204 | 28751.4 |
| dihydroneopterin aldolase | SAMN06295900_108174 | Not Available | Positive | 3793317 - 3793712 | 14895.0 |
| trna s(2)c-32 sulfurtransferase | SAMN06295900_108175 | Not Available | Positive | 3793716 - 3794732 | 36970.4 |
| udp-n-acetylglucosamine pyrophosphorylase /glucosamine-1-phosphate n-acetyltransferase | SAMN06295900_108176 | Not Available | Positive | 3794860 - 3796221 | 47468.8 |
| glutamine--fructose-6-phosphate transaminase | SAMN06295900_108177 | Not Available | Positive | 3796304 - 3798121 | 65591.7 |
| head domain of trimeric autotransporter adhesin | SAMN06295900_108178 | Not Available | Positive | 3798966 - 3800231 | 43088.5 |
| nitt/taut family transport system permease protein | SAMN06295900_108179 | Not Available | Positive | 3800402 - 3802123 | 64506.9 |
| nitt/taut family transport system atp-binding protein | SAMN06295900_108180 | Not Available | Positive | 3802140 - 3802964 | 29818.5 |
| outer membrane protein beta-barrel domain-containing protein | SAMN06295900_108181 | Not Available | Positive | 3803001 - 3803579 | 20593.5 |
| hypothetical protein | SAMN06295900_108182 | Not Available | Positive | 3803624 - 3804100 | 18064.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.