Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide transport system permease protein | SAMN06295900_108153 | Not Available | Positive | 3774333 - 3775343 | 36402.9 |
| dipeptide transport system permease protein | SAMN06295900_108154 | Not Available | Positive | 3775353 - 3776270 | 32186.1 |
| dipeptide transport system atp-binding protein | SAMN06295900_108155 | Not Available | Positive | 3776273 - 3777283 | 35892.0 |
| dipeptide transport system atp-binding protein | SAMN06295900_108156 | Not Available | Positive | 3777280 - 3778296 | 37562.6 |
| hypothetical protein | SAMN06295900_108157 | Not Available | Positive | 3778289 - 3779419 | 39724.9 |
| hypothetical protein | SAMN06295900_108158 | Not Available | Negative | 3779470 - 3779700 | 8784.61 |
| regulatory protein, luxr family | SAMN06295900_108159 | Not Available | Negative | 3779774 - 3779998 | 8076.92 |
| hypothetical protein | SAMN06295900_108160 | Not Available | Positive | 3780890 - 3781300 | 15552.8 |
| hypothetical protein | SAMN06295900_108161 | Not Available | Positive | 3781318 - 3781536 | 7878.61 |
| phasin protein | SAMN06295900_108162 | Not Available | Positive | 3781585 - 3782139 | 19728.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.