Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylhomocysteinase | SAMN06295900_108143 | Not Available | Positive | 3762748 - 3764169 | 52390.4 |
| putative membrane protein | SAMN06295900_108144 | Not Available | Positive | 3764373 - 3764726 | 12643.3 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN06295900_108145 | Not Available | Positive | 3764740 - 3765582 | 31065.3 |
| dipeptide transport system substrate-binding protein | SAMN06295900_108146 | Not Available | Positive | 3765791 - 3767443 | 61519.6 |
| hypothetical protein | SAMN06295900_108147 | Not Available | Negative | 3767515 - 3768711 | 42524.7 |
| ycao-like family protein | SAMN06295900_108148 | Not Available | Negative | 3768720 - 3769661 | 34401.9 |
| hexxh motif-containing protein | SAMN06295900_108149 | Not Available | Negative | 3769648 - 3770727 | 40520.0 |
| hexxh motif-containing protein | SAMN06295900_108150 | Not Available | Negative | 3770724 - 3771899 | 44579.8 |
| hypothetical protein | SAMN06295900_108151 | Not Available | Negative | 3771924 - 3772037 | 4083.74 |
| dipeptide transport system substrate-binding protein | SAMN06295900_108152 | Not Available | Positive | 3772562 - 3774196 | 60489.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.