Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_108132 | Not Available | Negative | 3752583 - 3752768 | 6264.06 |
| hypothetical protein | SAMN06295900_108133 | Not Available | Negative | 3752996 - 3753271 | 8859.39 |
| hypothetical protein | SAMN06295900_108134 | Not Available | Positive | 3753469 - 3753804 | 11871.7 |
| ser/thr protein kinase rdoa involved in cpx stress response, mazf antagonist | SAMN06295900_108135 | Not Available | Positive | 3753898 - 3754950 | 39458.4 |
| coniferyl-aldehyde dehydrogenase | SAMN06295900_108136 | Not Available | Negative | 3755002 - 3756420 | 51231.4 |
| putative acyl-coa dehydrogenase | SAMN06295900_108137 | Not Available | Negative | 3756465 - 3758168 | 61590.6 |
| choline dehydrogenase | SAMN06295900_108138 | Not Available | Positive | 3758531 - 3760201 | 59692.3 |
| transcriptional regulator, lysr family | SAMN06295900_108139 | Not Available | Negative | 3760156 - 3761100 | 34531.8 |
| holin-like protein | SAMN06295900_108140 | Not Available | Positive | 3761298 - 3761720 | 15017.0 |
| tigr00659 family protein | SAMN06295900_108141 | Not Available | Positive | 3761773 - 3762510 | 25970.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.