Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase /23s rrna m(5)c-1962 methyltransferase | SAMN06295900_108112 | Not Available | Negative | 3732375 - 3733664 | 46406.2 |
| integrase/recombinase xerc | SAMN06295900_108113 | Not Available | Negative | 3733758 - 3734687 | 33407.0 |
| hypothetical protein | SAMN06295900_108114 | Not Available | Negative | 3734740 - 3735486 | 26715.6 |
| diaminopimelate epimerase | SAMN06295900_108115 | Not Available | Negative | 3735541 - 3736407 | 30791.7 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN06295900_108116 | Not Available | Negative | 3736460 - 3737344 | 33558.9 |
| methionine adenosyltransferase | SAMN06295900_108117 | Not Available | Positive | 3737619 - 3738806 | 42717.7 |
| hypothetical protein | SAMN06295900_108118 | Not Available | Negative | 3738960 - 3739157 | 6860.71 |
| copper chaperone nosl | SAMN06295900_108119 | Not Available | Negative | 3739224 - 3739913 | 23728.0 |
| cu-processing system permease protein | SAMN06295900_108120 | Not Available | Negative | 3739916 - 3740749 | 29015.1 |
| cu-processing system atp-binding protein | SAMN06295900_108121 | Not Available | Negative | 3740746 - 3741684 | 33102.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.