Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, sensor histidine kinase regb | SAMN06295900_108102 | Not Available | Positive | 3720247 - 3721506 | 45415.9 |
| two component transcriptional regulator, fis family | SAMN06295900_108103 | Not Available | Positive | 3721509 - 3722051 | 19573.5 |
| hypothetical protein | SAMN06295900_108104 | Not Available | Negative | 3722129 - 3722866 | 26761.5 |
| hypothetical protein | SAMN06295900_108105 | Not Available | Negative | 3723231 - 3724289 | 38009.3 |
| para-nitrobenzyl esterase | SAMN06295900_108106 | Not Available | Negative | 3724655 - 3726448 | 64461.3 |
| yopt-like peptidase. cysteine peptidase. merops family c58 | SAMN06295900_108107 | Not Available | Negative | 3726724 - 3727770 | 39119.0 |
| atp-dependent hsluv protease atp-binding subunit hslu | SAMN06295900_108108 | Not Available | Negative | 3727948 - 3729285 | 49500.4 |
| hslv component of hsluv peptidase. threonine peptidase. merops family t01b | SAMN06295900_108109 | Not Available | Negative | 3729293 - 3729829 | 19057.0 |
| transcriptional regulator, trar/dksa family | SAMN06295900_108110 | Not Available | Negative | 3730252 - 3730671 | 16154.3 |
| gtpase, g3e family | SAMN06295900_108111 | Not Available | Negative | 3731160 - 3732224 | 39965.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.