Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para-nitrobenzyl esterase | SAMN06295900_10892 | Not Available | Negative | 3707364 - 3709016 | 59101.3 |
| para-nitrobenzyl esterase | SAMN06295900_10893 | Not Available | Negative | 3709378 - 3711072 | 61053.9 |
| para-nitrobenzyl esterase | SAMN06295900_10894 | Not Available | Negative | 3711094 - 3712806 | 62450.9 |
| peptidase family m48 | SAMN06295900_10895 | Not Available | Negative | 3713057 - 3714046 | 35337.3 |
| mfs transporter, pat family, beta-lactamase induction signal transducer ampg | SAMN06295900_10896 | Not Available | Negative | 3714043 - 3715329 | 46377.2 |
| methionine biosynthesis protein metw | SAMN06295900_10897 | Not Available | Negative | 3715369 - 3715998 | 23239.9 |
| homoserine o-acetyltransferase | SAMN06295900_10898 | Not Available | Negative | 3715995 - 3717146 | 42013.5 |
| transcriptional regulator, tetr family | SAMN06295900_10899 | Not Available | Negative | 3717420 - 3718094 | 24141.3 |
| pyrimidine 5'-nucleotidase | SAMN06295900_108100 | Not Available | Negative | 3718081 - 3718860 | 29117.8 |
| n-acetylglutamate kinase | SAMN06295900_108101 | Not Available | Negative | 3718911 - 3719810 | 32029.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.