Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mred | SAMN06295900_10882 | Not Available | Negative | 3695134 - 3695646 | 18926.8 |
| rod shape-determining protein mrec | SAMN06295900_10883 | Not Available | Negative | 3695643 - 3696782 | 39257.0 |
| rod shape-determining protein mreb | SAMN06295900_10884 | Not Available | Negative | 3696882 - 3697925 | 36997.0 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | SAMN06295900_10885 | Not Available | Positive | 3698312 - 3698611 | 10876.0 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN06295900_10886 | Not Available | Positive | 3698639 - 3700129 | 52559.2 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | SAMN06295900_10887 | Not Available | Positive | 3700126 - 3701598 | 53477.9 |
| polyphosphate:amp phosphotransferase | SAMN06295900_10888 | Not Available | Positive | 3701674 - 3702513 | 31757.6 |
| exodeoxyribonuclease-3 | SAMN06295900_10889 | Not Available | Positive | 3702601 - 3703377 | 29382.6 |
| para-nitrobenzyl esterase | SAMN06295900_10890 | Not Available | Negative | 3703423 - 3705144 | 61122.9 |
| para-nitrobenzyl esterase | SAMN06295900_10891 | Not Available | Negative | 3705386 - 3707074 | 60423.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.