Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multi-sensor signal transduction histidine kinase | SAMN06295900_10872 | Not Available | Positive | 3684414 - 3686825 | 86977.6 |
| two component transcriptional regulator, fis family | SAMN06295900_10873 | Not Available | Positive | 3686826 - 3687515 | 24518.7 |
| Trna-phe | Not Available | Not Available | Positive | 3687638 - 3687713 | Not Available |
| preq(0) biosynthesis protein quec | SAMN06295900_10875 | Not Available | Positive | 3687968 - 3688693 | 26510.7 |
| 7-carboxy-7-deazaguanine synthase, cx14cxxc type | SAMN06295900_10876 | Not Available | Positive | 3688745 - 3689377 | 23497.0 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN06295900_10877 | Not Available | Positive | 3689374 - 3689835 | 17434.8 |
| 2-dehydro-3-deoxyglucarate aldolase | SAMN06295900_10878 | Not Available | Positive | 3690032 - 3690814 | 27293.6 |
| tpr repeat | SAMN06295900_10879 | Not Available | Positive | 3690811 - 3691545 | 26619.9 |
| cell elongation-specific peptidoglycan biosynthesis regulator roda | SAMN06295900_10880 | Not Available | Negative | 3691578 - 3692726 | 41764.7 |
| penicillin-binding protein 2 | SAMN06295900_10881 | Not Available | Negative | 3692738 - 3695116 | 85311.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.