Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN06295900_10862 | Not Available | Positive | 3672991 - 3674079 | 39752.0 |
| dna topoisomerase-3 | SAMN06295900_10863 | Not Available | Negative | 3674286 - 3676913 | 96672.4 |
| thioredoxin | SAMN06295900_10864 | Not Available | Negative | 3677105 - 3677482 | 13850.5 |
| dna protecting protein dpra | SAMN06295900_10865 | Not Available | Negative | 3677532 - 3678764 | 41699.5 |
| peptide deformylase | SAMN06295900_10866 | Not Available | Positive | 3678981 - 3679484 | 18827.0 |
| methionyl-trna formyltransferase | SAMN06295900_10867 | Not Available | Positive | 3679516 - 3680505 | 34639.7 |
| resistance to homoserine/threonine (rhtb) family protein | SAMN06295900_10868 | Not Available | Positive | 3680582 - 3681226 | 22567.1 |
| heat shock protein. metallo peptidase. merops family m48b | SAMN06295900_10869 | Not Available | Positive | 3681345 - 3682202 | 30943.9 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN06295900_10870 | Not Available | Positive | 3682374 - 3683834 | 52046.1 |
| protein of unknown function | SAMN06295900_10871 | Not Available | Positive | 3683831 - 3684424 | 22206.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.