Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nyn domain-containing protein | SAMN06295900_10852 | Not Available | Negative | 3662893 - 3663657 | 27780.6 |
| hypothetical protein | SAMN06295900_10853 | Not Available | Negative | 3663979 - 3664905 | 36054.7 |
| hypothetical protein | SAMN06295900_10854 | Not Available | Negative | 3665005 - 3665304 | 11409.9 |
| protein of unknown function | SAMN06295900_10855 | Not Available | Negative | 3665337 - 3666554 | 44059.6 |
| vrr-nuc domain-containing protein | SAMN06295900_10856 | Not Available | Negative | 3666565 - 3667314 | 27118.2 |
| zn-binding pro-ala-ala-arg (paar) domain-containing protein, incolved in typevi secretion | SAMN06295900_10857 | Not Available | Negative | 3667311 - 3667838 | 17909.7 |
| Trna-lys | Not Available | Not Available | Positive | 3668196 - 3668271 | Not Available |
| patatin-like phospholipase | SAMN06295900_10859 | Not Available | Positive | 3668557 - 3669429 | 32572.3 |
| d-3-phosphoglycerate dehydrogenase | SAMN06295900_10860 | Not Available | Negative | 3669549 - 3670565 | 37385.1 |
| phosphoenolpyruvate carboxykinase (gtp) | SAMN06295900_10861 | Not Available | Positive | 3670875 - 3672737 | 68543.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.