Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN06295900_10842 | Not Available | Negative | 3656047 - 3656916 | 31425.2 |
| transcriptional regulator, lysr family | SAMN06295900_10843 | Not Available | Positive | 3657027 - 3657923 | 32225.0 |
| protein of unknown function | SAMN06295900_10844 | Not Available | Negative | 3658102 - 3658530 | 13951.5 |
| protein of unknown function | SAMN06295900_10845 | Not Available | Positive | 3658846 - 3659226 | 13273.9 |
| beta-barrel assembly machine subunit bame | SAMN06295900_10846 | Not Available | Positive | 3659223 - 3659765 | 19877.4 |
| hypothetical protein | SAMN06295900_10847 | Not Available | Positive | 3660138 - 3660335 | 7465.86 |
| hypothetical protein | SAMN06295900_10848 | Not Available | Negative | 3660465 - 3660782 | 11603.3 |
| phage integrase family protein | SAMN06295900_10849 | Not Available | Positive | 3661161 - 3662171 | 37884.7 |
| phage-related protein | SAMN06295900_10850 | Not Available | Positive | 3662203 - 3662520 | 12132.0 |
| helix-turn-helix | SAMN06295900_10851 | Not Available | Positive | 3662524 - 3662805 | 10197.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.