Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | SAMN06295900_10832 | Not Available | Negative | 3645838 - 3646401 | 20174.2 |
| hypothetical protein | SAMN06295900_10833 | Not Available | Positive | 3646489 - 3646926 | 16510.7 |
| catechol 2,3-dioxygenase | SAMN06295900_10834 | Not Available | Positive | 3647052 - 3647417 | 13079.4 |
| transcriptional regulator, laci family | SAMN06295900_10835 | Not Available | Negative | 3647549 - 3648688 | 40698.0 |
| levansucrase | SAMN06295900_10836 | Not Available | Positive | 3648746 - 3650395 | 58937.1 |
| regulatory protein, gntr family | SAMN06295900_10837 | Not Available | Positive | 3650492 - 3650746 | 9091.11 |
| levanbiose-producing levanase | SAMN06295900_10838 | Not Available | Positive | 3650885 - 3652561 | 60784.8 |
| transcriptional regulator, lysr family | SAMN06295900_10839 | Not Available | Negative | 3652548 - 3653432 | 31828.9 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN06295900_10840 | Not Available | Positive | 3653559 - 3654491 | 33404.9 |
| hypothetical protein | SAMN06295900_10841 | Not Available | Negative | 3654518 - 3655705 | 41665.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.