Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_10822 | Not Available | Negative | 3634528 - 3635169 | 22111.8 |
| hypothetical protein | SAMN06295900_10823 | Not Available | Positive | 3635698 - 3636024 | 12082.1 |
| protein of unknown function | SAMN06295900_10824 | Not Available | Negative | 3636250 - 3637041 | 28984.1 |
| hypothetical protein | SAMN06295900_10825 | Not Available | Negative | 3637201 - 3638688 | 54589.7 |
| type vi secretion system secreted protein vgrg | SAMN06295900_10826 | Not Available | Positive | 3639090 - 3642125 | 108597.0 |
| ankyrin repeat-containing protein | SAMN06295900_10827 | Not Available | Positive | 3642125 - 3642916 | 28413.2 |
| hypothetical protein | SAMN06295900_10828 | Not Available | Positive | 3643008 - 3643826 | 30370.9 |
| zn-binding pro-ala-ala-arg (paar) domain-containing protein, incolved in typevi secretion | SAMN06295900_10829 | Not Available | Positive | 3643846 - 3645072 | 41947.4 |
| hypothetical protein | SAMN06295900_10830 | Not Available | Positive | 3645069 - 3645503 | 17025.2 |
| hypothetical protein | SAMN06295900_10831 | Not Available | Positive | 3645565 - 3645810 | 9723.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.