Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c553 | SAMN06295900_10812 | Not Available | Positive | 3626881 - 3627588 | 24782.6 |
| cytochrome c, mono-and diheme variants | SAMN06295900_10813 | Not Available | Positive | 3627585 - 3628874 | 46345.0 |
| cytochrome c oxidase subunit iia family protein | SAMN06295900_10814 | Not Available | Positive | 3628887 - 3629069 | 6474.85 |
| cytochrome c oxidase subunit 2 | SAMN06295900_10815 | Not Available | Positive | 3629079 - 3629648 | 20611.8 |
| cytochrome c oxidase subunit 1 | SAMN06295900_10816 | Not Available | Positive | 3629638 - 3631263 | 60034.0 |
| cytochrome c553 | SAMN06295900_10817 | Not Available | Positive | 3631260 - 3632051 | 28274.8 |
| lrp/asnc family transcriptional regulator | SAMN06295900_10818 | Not Available | Negative | 3632260 - 3632745 | 17649.6 |
| protein of unknown function | SAMN06295900_10819 | Not Available | Negative | 3632892 - 3633089 | 7500.86 |
| hypothetical protein | SAMN06295900_10820 | Not Available | Positive | 3633265 - 3633795 | 18482.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06295900_10821 | Not Available | Negative | 3633805 - 3634350 | 20454.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.