Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l1p | SAMN06295900_107232 | Not Available | Negative | 3610391 - 3611092 | 24390.7 |
| lsu ribosomal protein l11p | SAMN06295900_107233 | Not Available | Negative | 3611093 - 3611524 | 14997.6 |
| transcription antitermination protein nusg | SAMN06295900_107234 | Not Available | Negative | 3611684 - 3612244 | 20965.2 |
| protein translocase subunit sece/sec61 gamma | SAMN06295900_107235 | Not Available | Negative | 3612246 - 3612578 | 12004.0 |
| Trna-trp | Not Available | Not Available | Positive | 3612663 - 3612738 | Not Available |
| translation elongation factor 1a (ef-1a/ef-tu) | SAMN06295900_107237 | Not Available | Negative | 3612807 - 3613997 | 43075.9 |
| Trna-thr | Not Available | Not Available | Positive | 3614061 - 3614135 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3614153 - 3614226 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 3614282 - 3614367 | Not Available |
| hypothetical protein | SAMN06295900_1081 | Not Available | Positive | 3614558 - 3614671 | 3912.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.