Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | SAMN06295900_107222 | Not Available | Positive | 3589143 - 3590663 | 55753.6 |
| nad(p) transhydrogenase subunit alpha | SAMN06295900_107223 | Not Available | Positive | 3590771 - 3591898 | 39524.1 |
| nad(p) transhydrogenase subunit alpha | SAMN06295900_107224 | Not Available | Positive | 3591923 - 3592231 | 10593.2 |
| nad(p) transhydrogenase subunit beta | SAMN06295900_107225 | Not Available | Positive | 3592241 - 3593707 | 49833.3 |
| pseudolysin/vibriolysin | SAMN06295900_107226 | Not Available | Positive | 3594105 - 3595925 | 66309.8 |
| hypothetical protein | SAMN06295900_107227 | Not Available | Negative | 3596057 - 3599416 | 121968.0 |
| dna-directed rna polymerase subunit beta' | SAMN06295900_107228 | Not Available | Negative | 3600357 - 3604622 | 157147.0 |
| dna-directed rna polymerase subunit beta | SAMN06295900_107229 | Not Available | Negative | 3604644 - 3608750 | 152826.0 |
| lsu ribosomal protein l12p | SAMN06295900_107230 | Not Available | Negative | 3609133 - 3609510 | 12660.3 |
| lsu ribosomal protein l10p | SAMN06295900_107231 | Not Available | Negative | 3609595 - 3610092 | 17538.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.