Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l23p | SAMN06295900_107212 | Not Available | Negative | 3577747 - 3578061 | 11743.4 |
| lsu ribosomal protein l4p | SAMN06295900_107213 | Not Available | Negative | 3578058 - 3578678 | 22748.4 |
| lsu ribosomal protein l3p | SAMN06295900_107214 | Not Available | Negative | 3578678 - 3579337 | 22978.0 |
| ssu ribosomal protein s10p | SAMN06295900_107215 | Not Available | Negative | 3579609 - 3579923 | 11956.7 |
| translation elongation factor 1a (ef-1a/ef-tu) | SAMN06295900_107216 | Not Available | Negative | 3580095 - 3581285 | 43075.9 |
| translation elongation factor 2 (ef-2/ef-g) | SAMN06295900_107217 | Not Available | Negative | 3581337 - 3583439 | 77607.0 |
| ssu ribosomal protein s7p | SAMN06295900_107218 | Not Available | Negative | 3583574 - 3584044 | 17651.7 |
| ssu ribosomal protein s12p | SAMN06295900_107219 | Not Available | Negative | 3584207 - 3584587 | 13986.0 |
| atp-dependent dna helicase recq | SAMN06295900_107220 | Not Available | Negative | 3584996 - 3586843 | 68054.4 |
| methyl-accepting chemotaxis protein | SAMN06295900_107221 | Not Available | Positive | 3587299 - 3588864 | 55137.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.