Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l5p | SAMN06295900_107202 | Not Available | Negative | 3572913 - 3573452 | 19981.6 |
| lsu ribosomal protein l24p | SAMN06295900_107203 | Not Available | Negative | 3573469 - 3573777 | 10674.2 |
| lsu ribosomal protein l14p | SAMN06295900_107204 | Not Available | Negative | 3573787 - 3574155 | 13481.7 |
| ssu ribosomal protein s17p | SAMN06295900_107205 | Not Available | Negative | 3574579 - 3574848 | 10178.3 |
| lsu ribosomal protein l29p | SAMN06295900_107206 | Not Available | Negative | 3574845 - 3575039 | 7379.03 |
| lsu ribosomal protein l16p | SAMN06295900_107207 | Not Available | Negative | 3575049 - 3575465 | 15570.2 |
| ssu ribosomal protein s3p | SAMN06295900_107208 | Not Available | Negative | 3575468 - 3576277 | 30060.3 |
| lsu ribosomal protein l22p | SAMN06295900_107209 | Not Available | Negative | 3576289 - 3576618 | 11816.5 |
| ssu ribosomal protein s19p | SAMN06295900_107210 | Not Available | Negative | 3576631 - 3576906 | 10108.4 |
| lsu ribosomal protein l2p | SAMN06295900_107211 | Not Available | Negative | 3576917 - 3577744 | 30260.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.