Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l36p | SAMN06295900_107192 | Not Available | Negative | 3568296 - 3568412 | 4410.7 |
| bacterial translation initiation factor 1 (bif-1) | SAMN06295900_107193 | Not Available | Negative | 3568433 - 3568651 | 8218.2 |
| protein translocase subunit secy/sec61 alpha | SAMN06295900_107194 | Not Available | Negative | 3568660 - 3570006 | 48843.9 |
| lsu ribosomal protein l15p | SAMN06295900_107195 | Not Available | Negative | 3570067 - 3570501 | 15069.5 |
| lsu ribosomal protein l30p | SAMN06295900_107196 | Not Available | Negative | 3570528 - 3570710 | 6635.29 |
| ssu ribosomal protein s5p | SAMN06295900_107197 | Not Available | Negative | 3570727 - 3571245 | 18137.3 |
| lsu ribosomal protein l18p | SAMN06295900_107198 | Not Available | Negative | 3571260 - 3571625 | 13048.8 |
| lsu ribosomal protein l6p | SAMN06295900_107199 | Not Available | Negative | 3571638 - 3572168 | 18880.1 |
| ssu ribosomal protein s8p | SAMN06295900_107200 | Not Available | Negative | 3572190 - 3572585 | 14256.6 |
| ssu ribosomal protein s14p | SAMN06295900_107201 | Not Available | Negative | 3572600 - 3572905 | 11646.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.