Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c553 | SAMN06295900_107181 | Not Available | Negative | 3559644 - 3560390 | 25895.3 |
| cell division checkpoint gtpase yiha | SAMN06295900_107182 | Not Available | Positive | 3560510 - 3561274 | 27557.1 |
| porphobilinogen synthase | SAMN06295900_107183 | Not Available | Positive | 3561592 - 3562590 | 36818.3 |
| thiol:disulfide interchange protein dsbd | SAMN06295900_107184 | Not Available | Negative | 3562610 - 3564505 | 65730.3 |
| divalent cation tolerance protein | SAMN06295900_107185 | Not Available | Negative | 3564498 - 3564830 | 12093.4 |
| lsu ribosomal protein l17p | SAMN06295900_107186 | Not Available | Negative | 3564986 - 3565381 | 15061.5 |
| dna-directed rna polymerase subunit alpha | SAMN06295900_107187 | Not Available | Negative | 3565583 - 3566560 | 35764.2 |
| ssu ribosomal protein s4p | SAMN06295900_107188 | Not Available | Negative | 3566684 - 3567307 | 23279.9 |
| ssu ribosomal protein s11p | SAMN06295900_107189 | Not Available | Negative | 3567456 - 3567860 | 14219.2 |
| ssu ribosomal protein s13p | SAMN06295900_107190 | Not Available | Negative | 3567889 - 3568254 | 13572.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.