Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | SAMN06295900_107161 | Not Available | Negative | 3536888 - 3537649 | 27310.5 |
| glycerol 3-phosphate abc transporter atp-binding protein | SAMN06295900_107162 | Not Available | Negative | 3537716 - 3538807 | 39274.7 |
| glycerol 3-phosphate abc transporter membrane protein | SAMN06295900_107163 | Not Available | Negative | 3538870 - 3539715 | 30889.7 |
| glycerol 3-phosphate abc transporter membrane protein | SAMN06295900_107164 | Not Available | Negative | 3539712 - 3540596 | 32003.4 |
| glycerol 3-phosphate-binding protein | SAMN06295900_107165 | Not Available | Negative | 3540728 - 3542056 | 48123.2 |
| dgtpase | SAMN06295900_107166 | Not Available | Negative | 3542135 - 3543349 | 45579.0 |
| 3-dehydroquinate synthase | SAMN06295900_107167 | Not Available | Negative | 3543399 - 3544475 | 37440.6 |
| shikimate kinase | SAMN06295900_107168 | Not Available | Negative | 3544472 - 3545122 | 23852.8 |
| type iv pilus assembly protein pilq | SAMN06295900_107169 | Not Available | Negative | 3545119 - 3546882 | 61947.4 |
| hypothetical protein | SAMN06295900_107170 | Not Available | Negative | 3546879 - 3547823 | 33213.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.