Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiazole-phosphate synthase | SAMN06295900_107140 | Not Available | Negative | 3512990 - 3513799 | 28721.6 |
| sulfur carrier protein | SAMN06295900_107141 | Not Available | Negative | 3513882 - 3514079 | 6607.99 |
| glycine oxidase | SAMN06295900_107142 | Not Available | Negative | 3514135 - 3515331 | 42106.7 |
| putative atp-binding cassette transporter | SAMN06295900_107144 | Not Available | Positive | 3515968 - 3517734 | 66338.1 |
| hypothetical protein | SAMN06295900_107145 | Not Available | Positive | 3517965 - 3518447 | 16728.8 |
| hypothetical protein | SAMN06295900_107146 | Not Available | Positive | 3518456 - 3519085 | 21278.5 |
| two component transcriptional regulator, winged helix family | SAMN06295900_107147 | Not Available | Positive | 3519199 - 3519963 | 28153.8 |
| flagellar l-ring protein precursor flgh | SAMN06295900_107148 | Not Available | Negative | 3520039 - 3520707 | 23175.8 |
| hypothetical protein | SAMN06295900_107149 | Not Available | Negative | 3520767 - 3521471 | 24935.5 |
| hypothetical protein | SAMN06295900_107150 | Not Available | Negative | 3521521 - 3521745 | 7366.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.