Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein impg | SAMN06295900_107130 | Not Available | Negative | 3502954 - 3504786 | 66203.0 |
| type vi secretion system protein impg | SAMN06295900_107131 | Not Available | Negative | 3504806 - 3506650 | 67761.9 |
| type vi secretion system protein impf | SAMN06295900_107132 | Not Available | Negative | 3506709 - 3507191 | 17871.5 |
| phospholipid transport system transporter-binding protein | SAMN06295900_107133 | Not Available | Negative | 3507472 - 3507786 | 10151.1 |
| phospholipid transport system substrate-binding protein | SAMN06295900_107134 | Not Available | Negative | 3507783 - 3508430 | 24287.9 |
| phospholipid-binding lipoprotein mlaa | SAMN06295900_107135 | Not Available | Negative | 3508548 - 3509498 | 32696.8 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN06295900_107136 | Not Available | Negative | 3509547 - 3510110 | 19087.2 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN06295900_107137 | Not Available | Negative | 3510153 - 3510929 | 27347.2 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN06295900_107138 | Not Available | Negative | 3510926 - 3511753 | 29806.0 |
| thiamine-phosphate diphosphorylase | SAMN06295900_107139 | Not Available | Negative | 3511846 - 3512964 | 39281.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.