Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN06295900_107120 | Not Available | Negative | 3490814 - 3492085 | 44602.2 |
| transcriptional regulator, bola protein family | SAMN06295900_107121 | Not Available | Negative | 3492192 - 3492440 | 9118.94 |
| abc-2 type transport system permease protein | SAMN06295900_107122 | Not Available | Negative | 3492470 - 3493270 | 29344.5 |
| abc-2 type transport system atp-binding protein | SAMN06295900_107123 | Not Available | Negative | 3493267 - 3494193 | 34028.3 |
| zn-binding pro-ala-ala-arg (paar) domain-containing protein, incolved in typevi secretion | SAMN06295900_107124 | Not Available | Negative | 3494437 - 3494688 | 9005.69 |
| hypothetical protein | SAMN06295900_107125 | Not Available | Negative | 3494854 - 3495555 | 26374.2 |
| hypothetical protein | SAMN06295900_107126 | Not Available | Negative | 3495608 - 3496342 | 28198.6 |
| hypothetical protein | SAMN06295900_107127 | Not Available | Negative | 3496339 - 3499260 | 106645.0 |
| protein of unknown function | SAMN06295900_107128 | Not Available | Negative | 3499303 - 3500292 | 36731.1 |
| rhs element vgr protein | SAMN06295900_107129 | Not Available | Negative | 3500297 - 3502804 | 91509.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.