Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyl-atp pyrophosphatase | SAMN06295900_107110 | Not Available | Negative | 3483062 - 3483424 | 13226.7 |
| phosphoribosyl-amp cyclohydrolase | SAMN06295900_107111 | Not Available | Negative | 3483494 - 3483901 | 15450.2 |
| imidazole glycerol phosphate synthase subunit hisf | SAMN06295900_107112 | Not Available | Negative | 3483927 - 3484700 | 27202.5 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN06295900_107113 | Not Available | Negative | 3484819 - 3485571 | 26802.8 |
| imidazole glycerol phosphate synthase subunit hish | SAMN06295900_107114 | Not Available | Negative | 3485695 - 3486333 | 23408.9 |
| multiple antibiotic resistance protein | SAMN06295900_107115 | Not Available | Negative | 3486336 - 3486956 | 21880.4 |
| imidazoleglycerol-phosphate dehydratase | SAMN06295900_107116 | Not Available | Negative | 3487006 - 3487593 | 21537.8 |
| histidinol phosphate aminotransferase apoenzyme | SAMN06295900_107117 | Not Available | Negative | 3487690 - 3488763 | 38547.4 |
| histidinol dehydrogenase | SAMN06295900_107118 | Not Available | Negative | 3488771 - 3490093 | 46654.7 |
| atp phosphoribosyltransferase (homohexameric) | SAMN06295900_107119 | Not Available | Negative | 3490152 - 3490817 | 23617.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.