Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinol-cytochrome c reductase cytochrome c1 subunit | SAMN06295900_107100 | Not Available | Negative | 3475189 - 3475956 | 28685.1 |
| ubiquinol-cytochrome c reductase cytochrome b subunit | SAMN06295900_107101 | Not Available | Negative | 3475979 - 3477361 | 52279.0 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | SAMN06295900_107102 | Not Available | Negative | 3477362 - 3477982 | 22383.5 |
| dinuclear metal center protein, ybgi/sa1388 family | SAMN06295900_107103 | Not Available | Negative | 3478209 - 3478955 | 27465.7 |
| serine protease degq | SAMN06295900_107104 | Not Available | Positive | 3478975 - 3480186 | 42343.9 |
| sec-independent protein translocase tatc | SAMN06295900_107105 | Not Available | Negative | 3480333 - 3481118 | 28758.1 |
| sec-independent protein translocase protein tatb | SAMN06295900_107106 | Not Available | Negative | 3481197 - 3481751 | 20082.0 |
| sec-independent protein translocase protein tata | SAMN06295900_107107 | Not Available | Negative | 3481798 - 3482040 | 8685.52 |
| histidine triad (hit) family protein | SAMN06295900_107108 | Not Available | Negative | 3482202 - 3482564 | 13122.8 |
| uncharacterized membrane protein | SAMN06295900_107109 | Not Available | Negative | 3482611 - 3483006 | 15131.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.