Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hicb family protein | SAMN06295900_10790 | Not Available | Positive | 3468469 - 3468606 | 4823.6 |
| addiction module toxin, rele/stbe family | SAMN06295900_10791 | Not Available | Negative | 3468886 - 3469170 | 10717.6 |
| hypothetical protein | SAMN06295900_10792 | Not Available | Negative | 3469170 - 3469457 | 10752.5 |
| hypothetical protein | SAMN06295900_10793 | Not Available | Negative | 3469757 - 3470272 | 19058.4 |
| abortive infection c-terminus | SAMN06295900_10794 | Not Available | Negative | 3470388 - 3471635 | 47325.9 |
| site-specific recombinase xerd | SAMN06295900_10795 | Not Available | Negative | 3471703 - 3472692 | 36877.4 |
| hypothetical protein | SAMN06295900_10796 | Not Available | Negative | 3472700 - 3473620 | 34020.7 |
| Trna-thr | Not Available | Not Available | Positive | 3473818 - 3473893 | Not Available |
| stringent starvation protein b | SAMN06295900_10798 | Not Available | Negative | 3473914 - 3474411 | 17426.3 |
| rna polymerase-associated protein | SAMN06295900_10799 | Not Available | Negative | 3474477 - 3475088 | 23695.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.