Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-binding pro-ala-ala-arg (paar) domain-containing protein, incolved in typevi secretion | SAMN06295900_10780 | Not Available | Negative | 3463030 - 3464295 | 42059.8 |
| hypothetical protein | SAMN06295900_10781 | Not Available | Positive | 3464314 - 3464583 | 10032.9 |
| hypothetical protein | SAMN06295900_10782 | Not Available | Positive | 3464947 - 3465567 | 23722.2 |
| d12 class n6 adenine-specific dna methyltransferase | SAMN06295900_10783 | Not Available | Positive | 3465585 - 3466049 | 17605.1 |
| dna adenine methylase | SAMN06295900_10784 | Not Available | Positive | 3466148 - 3466357 | 7420.88 |
| protein of unknown function | SAMN06295900_10785 | Not Available | Positive | 3466469 - 3466903 | 16217.4 |
| hypothetical protein | SAMN06295900_10786 | Not Available | Positive | 3466900 - 3467205 | 11350.4 |
| adenylate kinase | SAMN06295900_10787 | Not Available | Positive | 3467286 - 3467864 | 21573.7 |
| hypothetical protein | SAMN06295900_10788 | Not Available | Positive | 3467979 - 3468251 | 9780.35 |
| hypothetical protein | SAMN06295900_10789 | Not Available | Positive | 3468248 - 3468469 | 8334.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.