Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN06295900_10770 | Not Available | Negative | 3456118 - 3456738 | 21914.2 |
| hypothetical protein | SAMN06295900_10771 | Not Available | Negative | 3456799 - 3457587 | 28753.0 |
| hypothetical protein | SAMN06295900_10772 | Not Available | Positive | 3457813 - 3457974 | 5497.78 |
| hypothetical protein | SAMN06295900_10773 | Not Available | Negative | 3457987 - 3458193 | 7510.94 |
| protein of unknown function | SAMN06295900_10774 | Not Available | Negative | 3458203 - 3458568 | 12116.1 |
| protein of unknown function | SAMN06295900_10775 | Not Available | Positive | 3458824 - 3459306 | 16903.8 |
| transposase, mutator family | SAMN06295900_10776 | Not Available | Positive | 3459342 - 3459728 | 13632.7 |
| hypothetical protein | SAMN06295900_10777 | Not Available | Positive | 3459923 - 3461341 | 49237.5 |
| tetratricopeptide repeat-containing protein | SAMN06295900_10778 | Not Available | Negative | 3462005 - 3462481 | 17926.5 |
| hypothetical protein | SAMN06295900_10779 | Not Available | Negative | 3462554 - 3463033 | 17301.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.