Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate o-acetyl transferase algf | SAMN06295900_10760 | Not Available | Negative | 3440597 - 3441292 | 24205.0 |
| d-alanine--poly(phosphoribitol) ligase subunit 1 | SAMN06295900_10761 | Not Available | Negative | 3441289 - 3442764 | 53583.3 |
| acyl carrier protein/d-alanine--poly(phosphoribitol) ligase subunit 2 | SAMN06295900_10762 | Not Available | Negative | 3442828 - 3443061 | 8395.09 |
| d-alanyl-lipoteichoic acid acyltransferase dltb, mboat superfamily | SAMN06295900_10763 | Not Available | Negative | 3443080 - 3444681 | 58749.2 |
| alginate o-acetyltransferase complex protein algj | SAMN06295900_10764 | Not Available | Negative | 3444696 - 3445820 | 40252.6 |
| alginate o-acetyltransferase complex protein algj | SAMN06295900_10765 | Not Available | Negative | 3445817 - 3446854 | 37542.9 |
| bacteriophage n adsorption protein a c-term | SAMN06295900_10766 | Not Available | Negative | 3446928 - 3449780 | 101294.0 |
| adsorption protein b | SAMN06295900_10767 | Not Available | Negative | 3449777 - 3451948 | 81070.0 |
| cellulose synthase subunit | SAMN06295900_10768 | Not Available | Negative | 3451948 - 3454158 | 76325.4 |
| udp-n-acetylglucosamine 2-epimerase | SAMN06295900_10769 | Not Available | Negative | 3454314 - 3455456 | 40530.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.