Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [protein release factor]-glutamine n5-methyltransferase | SAMN06295900_10730 | Not Available | Positive | 3407532 - 3408419 | 30774.6 |
| monothiol glutaredoxin | SAMN06295900_10731 | Not Available | Positive | 3408550 - 3408864 | 11664.2 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN06295900_10732 | Not Available | Positive | 3408896 - 3409495 | 21422.1 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN06295900_10733 | Not Available | Negative | 3409649 - 3411238 | 57682.0 |
| cold-shock dna-binding protein family | SAMN06295900_10734 | Not Available | Positive | 3411679 - 3411882 | 7347.67 |
| hypothetical chaperone protein | SAMN06295900_10735 | Not Available | Negative | 3411991 - 3413250 | 45672.4 |
| predicted arabinose efflux permease, mfs family | SAMN06295900_10736 | Not Available | Positive | 3413411 - 3414883 | 52685.1 |
| predicted arabinose efflux permease, mfs family | SAMN06295900_10737 | Not Available | Negative | 3414972 - 3416258 | 45329.1 |
| transcriptional regulator, tetr family | SAMN06295900_10738 | Not Available | Positive | 3416461 - 3417138 | 23906.3 |
| hypothetical protein | SAMN06295900_10739 | Not Available | Positive | 3417311 - 3417868 | 20999.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.