Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol:disulfide interchange protein dsbc | SAMN06295900_10720 | Not Available | Negative | 3395165 - 3395890 | 25645.7 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | SAMN06295900_10721 | Not Available | Negative | 3395961 - 3397133 | 41994.7 |
| hypothetical protein | SAMN06295900_10722 | Not Available | Positive | 3397551 - 3398645 | 39145.0 |
| predicted atpase | SAMN06295900_10723 | Not Available | Positive | 3398798 - 3400024 | 46227.9 |
| sulfate-transporting atpase | SAMN06295900_10724 | Not Available | Positive | 3400172 - 3401839 | 61650.3 |
| 2-haloacid dehalogenase | SAMN06295900_10725 | Not Available | Negative | 3401940 - 3402569 | 23318.9 |
| xaa-pro aminopeptidase | SAMN06295900_10726 | Not Available | Negative | 3402639 - 3404465 | 64804.0 |
| hypothetical protein | SAMN06295900_10727 | Not Available | Negative | 3404481 - 3404735 | 8842.98 |
| glutamyl-trna reductase | SAMN06295900_10728 | Not Available | Positive | 3404986 - 3406308 | 47865.4 |
| bacterial peptide chain release factor 1 (brf-1) | SAMN06295900_10729 | Not Available | Positive | 3406404 - 3407486 | 40526.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.