Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-5-phosphate 3-epimerase | SAMN06295900_10710 | Not Available | Positive | 3384950 - 3385636 | 24911.0 |
| phosphoglycolate phosphatase | SAMN06295900_10711 | Not Available | Positive | 3385638 - 3386399 | 26448.3 |
| anthranilate synthase, component i | SAMN06295900_10712 | Not Available | Positive | 3386700 - 3388193 | 54971.8 |
| anthranilate synthase, component ii | SAMN06295900_10713 | Not Available | Positive | 3388208 - 3388798 | 21759.1 |
| anthranilate phosphoribosyltransferase | SAMN06295900_10714 | Not Available | Positive | 3388854 - 3389885 | 36880.6 |
| indole-3-glycerol phosphate synthase | SAMN06295900_10715 | Not Available | Positive | 3389938 - 3390723 | 28753.8 |
| adenylate cyclase | SAMN06295900_10716 | Not Available | Positive | 3390730 - 3391356 | 22006.0 |
| uracil-dna glycosylase | SAMN06295900_10717 | Not Available | Positive | 3391363 - 3392181 | 29904.4 |
| fmn-dependent nadh-azoreductase | SAMN06295900_10718 | Not Available | Negative | 3392402 - 3393001 | 20744.7 |
| predicted metalloprotease, contains c-terminal pdz domain | SAMN06295900_10719 | Not Available | Negative | 3393244 - 3395064 | 66894.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.