Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295900_106443 | Not Available | Positive | 3375550 - 3375767 | 6632.9 |
| short chain enoyl-coa hydratase | SAMN06295900_1071 | Not Available | Negative | 3376159 - 3376935 | 27945.1 |
| phenylacetic acid degradation protein paan | SAMN06295900_1072 | Not Available | Positive | 3377082 - 3378791 | 60837.1 |
| acetyl-coa c-acetyltransferase | SAMN06295900_1073 | Not Available | Positive | 3378880 - 3380082 | 41658.1 |
| short chain enoyl-coa hydratase /enoyl-coa hydratase | SAMN06295900_1074 | Not Available | Positive | 3380148 - 3380939 | 28020.5 |
| acyl-coa thioesterase | SAMN06295900_1075 | Not Available | Positive | 3380941 - 3381411 | 16580.6 |
| phenylacetate-coa ligase | SAMN06295900_1076 | Not Available | Positive | 3381527 - 3382831 | 48166.7 |
| hypothetical protein | SAMN06295900_1077 | Not Available | Negative | 3382820 - 3383044 | 7568.95 |
| membrane-bound lytic murein transglycosylase a | SAMN06295900_1078 | Not Available | Negative | 3383167 - 3384291 | 39885.6 |
| apag protein | SAMN06295900_1079 | Not Available | Negative | 3384370 - 3384744 | 14052.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.