Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein tadd, contains tpr repeats | SAMN06295900_106423 | Not Available | Negative | 3354586 - 3355491 | 31040.4 |
| type ii secretion system protein f (gspf) | SAMN06295900_106424 | Not Available | Negative | 3355533 - 3356480 | 33820.6 |
| flp pilus assembly protein tadb | SAMN06295900_106425 | Not Available | Negative | 3356477 - 3357466 | 36005.6 |
| pilus assembly protein cpaf | SAMN06295900_106426 | Not Available | Negative | 3357463 - 3358983 | 54643.6 |
| pilus assembly protein cpae | SAMN06295900_106427 | Not Available | Negative | 3358980 - 3360197 | 43102.7 |
| pilus biogenesis cpad protein (pilus_cpad) | SAMN06295900_106428 | Not Available | Negative | 3360266 - 3360664 | 13457.2 |
| pilus assembly protein cpac | SAMN06295900_106429 | Not Available | Negative | 3360688 - 3362112 | 49840.1 |
| pilus assembly protein cpab | SAMN06295900_106430 | Not Available | Negative | 3362123 - 3363133 | 33864.6 |
| prepilin peptidase cpaa | SAMN06295900_106431 | Not Available | Negative | 3363149 - 3363676 | 18083.6 |
| pilus assembly protein flp/pila | SAMN06295900_106432 | Not Available | Negative | 3363777 - 3363968 | 6599.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.