Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine protease do | SAMN06295900_106413 | Not Available | Positive | 3342270 - 3343754 | 51287.2 |
| hypothetical protein | SAMN06295900_106414 | Not Available | Positive | 3343938 - 3344432 | 17015.9 |
| uncharacterized conserved protein, duf427 family | SAMN06295900_106415 | Not Available | Positive | 3344570 - 3344932 | 13969.1 |
| carbon monoxide dehydrogenase subunit g | SAMN06295900_106416 | Not Available | Positive | 3344964 - 3345767 | 28358.4 |
| transcriptional regulator, tetr family | SAMN06295900_106417 | Not Available | Negative | 3345827 - 3346516 | 25295.5 |
| membrane fusion protein, multidrug efflux system | SAMN06295900_106418 | Not Available | Positive | 3346936 - 3348138 | 41417.6 |
| multidrug efflux pump | SAMN06295900_106419 | Not Available | Positive | 3348157 - 3351399 | 115945.0 |
| outer membrane protein, multidrug efflux system | SAMN06295900_106420 | Not Available | Positive | 3351401 - 3352906 | 53993.7 |
| putative tad-like flp pilus-assembly | SAMN06295900_106421 | Not Available | Negative | 3353083 - 3354063 | 33455.5 |
| tade-like protein | SAMN06295900_106422 | Not Available | Negative | 3354161 - 3354589 | 14628.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.