Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein t | SAMN06295900_106373 | Not Available | Negative | 3306096 - 3306884 | 28491.9 |
| type iii secretion protein s | SAMN06295900_106374 | Not Available | Negative | 3306881 - 3307150 | 9730.3 |
| type iii secretion protein r | SAMN06295900_106375 | Not Available | Negative | 3307194 - 3307844 | 23856.3 |
| type iii secretion protein q | SAMN06295900_106376 | Not Available | Negative | 3307937 - 3308983 | 36919.3 |
| hypothetical protein | SAMN06295900_106377 | Not Available | Negative | 3308961 - 3309545 | 20357.6 |
| hypothetical protein | SAMN06295900_106378 | Not Available | Negative | 3309548 - 3309907 | 13751.5 |
| atp synthase in type iii secretion protein n | SAMN06295900_106379 | Not Available | Negative | 3309904 - 3311247 | 47571.8 |
| type iii secretion protein v | SAMN06295900_106380 | Not Available | Negative | 3311250 - 3313298 | 73862.2 |
| type iii secretion chaperone sycn | SAMN06295900_106381 | Not Available | Negative | 3313312 - 3313668 | 13535.9 |
| two component transcriptional regulator, luxr family | SAMN06295900_106382 | Not Available | Negative | 3313810 - 3314490 | 24680.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.