Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06295900_106363 | Not Available | Negative | 3297865 - 3298458 | 22148.1 |
| hypothetical protein | SAMN06295900_106364 | Not Available | Negative | 3298451 - 3299503 | 38664.1 |
| conserved hypothetical protein | SAMN06295900_106365 | Not Available | Negative | 3299555 - 3300007 | 16322.1 |
| heptosyltransferase-2 | SAMN06295900_106366 | Not Available | Negative | 3300183 - 3301217 | 37771.1 |
| uncharacterized conserved protein, contains zn-finger domain | SAMN06295900_106367 | Not Available | Negative | 3301405 - 3301599 | 7186.73 |
| branched chain amino acid aminotransferase apoenzyme | SAMN06295900_106368 | Not Available | Negative | 3301655 - 3302578 | 33942.3 |
| predicted branched-chain amino acid permease (azaleucine resistance) | SAMN06295900_106369 | Not Available | Positive | 3302878 - 3303651 | 27576.2 |
| branched-chain amino acid transport protein | SAMN06295900_106370 | Not Available | Positive | 3303648 - 3303971 | 11634.6 |
| transglycosylase slt domain-containing protein | SAMN06295900_106371 | Not Available | Negative | 3303999 - 3305042 | 34693.8 |
| type iii secretion protein u | SAMN06295900_106372 | Not Available | Negative | 3305023 - 3306099 | 39167.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.