Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa synthetase (adp-forming) alpha subunit | SAMN06295900_106353 | Not Available | Positive | 3287703 - 3288584 | 30930.6 |
| integral membrane protein, yjbe family | SAMN06295900_106354 | Not Available | Positive | 3288812 - 3289528 | 25241.9 |
| type iv pilus assembly protein pila | SAMN06295900_106355 | Not Available | Positive | 3289725 - 3290306 | 19919.8 |
| o-antigen ligase | SAMN06295900_106356 | Not Available | Positive | 3290451 - 3292226 | 64923.0 |
| transcriptional regulator, arac family | SAMN06295900_106357 | Not Available | Positive | 3292376 - 3293215 | 31339.4 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN06295900_106358 | Not Available | Negative | 3293228 - 3293815 | 20712.6 |
| cyclic pyranopterin monophosphate synthase subunit moac | SAMN06295900_106359 | Not Available | Negative | 3294024 - 3294518 | 17303.1 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN06295900_106360 | Not Available | Negative | 3294677 - 3295558 | 31719.9 |
| sugar phosphate permease | SAMN06295900_106361 | Not Available | Negative | 3295555 - 3296862 | 46317.3 |
| transcriptional regulator, gntr family | SAMN06295900_106362 | Not Available | Negative | 3296942 - 3297664 | 27351.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.