Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN06295900_106333 | Not Available | Positive | 3268245 - 3268613 | 13078.9 |
| chemotaxis protein chec | SAMN06295900_106334 | Not Available | Positive | 3268606 - 3269241 | 22818.4 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN06295900_106335 | Not Available | Positive | 3269263 - 3270213 | 34857.4 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN06295900_106336 | Not Available | Positive | 3270381 - 3270728 | 12170.9 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN06295900_106337 | Not Available | Negative | 3270815 - 3271390 | 20589.6 |
| arac-type dna-binding protein | SAMN06295900_106338 | Not Available | Negative | 3271499 - 3272323 | 30270.4 |
| hypothetical protein | SAMN06295900_106339 | Not Available | Positive | 3272416 - 3273042 | 22638.2 |
| hypothetical protein | SAMN06295900_106340 | Not Available | Negative | 3273117 - 3273419 | 10655.7 |
| transcriptional regulator, badm/rrf2 family | SAMN06295900_106341 | Not Available | Negative | 3273416 - 3273907 | 18085.8 |
| thioredoxin reductase | SAMN06295900_106342 | Not Available | Positive | 3274037 - 3274951 | 31757.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.