Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c553 | SAMN06295900_106293 | Not Available | Negative | 3219824 - 3220678 | 30784.7 |
| putative copper resistance protein d | SAMN06295900_106294 | Not Available | Positive | 3221110 - 3222030 | 30900.1 |
| galactonate dehydratase | SAMN06295900_106295 | Not Available | Negative | 3222174 - 3223322 | 42327.6 |
| transcriptional regulator, gntr family | SAMN06295900_106296 | Not Available | Positive | 3223635 - 3224210 | 21050.7 |
| hypothetical protein | SAMN06295900_106297 | Not Available | Positive | 3224358 - 3224510 | 5663.95 |
| 2-aminoethylphosphonate transport system substrate-binding protein | SAMN06295900_106298 | Not Available | Positive | 3224815 - 3225906 | 38944.8 |
| 2-aminoethylphosphonate transport system atp-binding protein | SAMN06295900_106299 | Not Available | Positive | 3225996 - 3227054 | 38045.4 |
| 2-aminoethylphosphonate transport system permease protein | SAMN06295900_106300 | Not Available | Positive | 3227032 - 3228027 | 35590.3 |
| 2-aminoethylphosphonate transport system permease protein | SAMN06295900_106301 | Not Available | Positive | 3228024 - 3228842 | 28128.3 |
| phosphonate degradation operons associated hdig domain protein | SAMN06295900_106302 | Not Available | Positive | 3228864 - 3229433 | 20458.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.