Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homodimeric glycerol 3-phosphate dehydrogenase (quinone) | SAMN06295900_106283 | Not Available | Negative | 3209598 - 3211154 | 56932.0 |
| hypothetical protein | SAMN06295900_106284 | Not Available | Positive | 3211349 - 3211714 | 12596.8 |
| hypothetical protein | SAMN06295900_106285 | Not Available | Positive | 3211795 - 3211938 | 5125.95 |
| hypothetical protein | SAMN06295900_106286 | Not Available | Negative | 3211875 - 3212072 | 7423.85 |
| transcriptional regulator, deor family | SAMN06295900_106287 | Not Available | Negative | 3212358 - 3213143 | 29123.7 |
| gamma-glutamyltransferase 2. threonine peptidase. merops family t03 | SAMN06295900_106288 | Not Available | Positive | 3213314 - 3214954 | 59114.5 |
| hypothetical protein | SAMN06295900_106289 | Not Available | Positive | 3215217 - 3216050 | 32540.8 |
| hypothetical protein | SAMN06295900_106290 | Not Available | Positive | 3216111 - 3216668 | 19737.2 |
| atp-dependent rna helicase rhle | SAMN06295900_106291 | Not Available | Negative | 3216729 - 3218315 | 56229.5 |
| cytochrome c, mono-and diheme variants | SAMN06295900_106292 | Not Available | Negative | 3218509 - 3219804 | 46712.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.