Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium and cobalt transporter | SAMN06295900_106272 | Not Available | Negative | 3199387 - 3200280 | 34068.3 |
| protein of unknown function | SAMN06295900_106273 | Not Available | Positive | 3200456 - 3201055 | 21185.0 |
| cation transport protein chac | SAMN06295900_106274 | Not Available | Negative | 3201133 - 3201792 | 23999.0 |
| probable rrna maturation factor | SAMN06295900_106275 | Not Available | Negative | 3201817 - 3202290 | 17386.4 |
| phosphate starvation-inducible protein phoh | SAMN06295900_106276 | Not Available | Negative | 3202375 - 3203448 | 39581.3 |
| pp_02831 | SAMN06295900_106277 | Not Available | Negative | 3203473 - 3204840 | Not Available |
| 3,4-dihydroxy 2-butanone 4-phosphate synthase | SAMN06295900_106279 | Not Available | Positive | 3205382 - 3206077 | 24267.4 |
| haloacid dehalogenase superfamily, subfamily ia, variant 2 with 3rd motif like haloacid dehalogenase/haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN06295900_106280 | Not Available | Negative | 3206240 - 3206932 | 23996.0 |
| glycerol uptake facilitator protein | SAMN06295900_106281 | Not Available | Negative | 3207150 - 3207857 | 24696.9 |
| glycerol kinase | SAMN06295900_106282 | Not Available | Negative | 3207985 - 3209484 | 54253.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.