Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic chaperone for outer membrane proteins sura | SAMN06295900_106262 | Not Available | Positive | 3188118 - 3189506 | 49884.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN06295900_106263 | Not Available | Positive | 3189517 - 3190539 | 35461.5 |
| dimethyladenosine transferase | SAMN06295900_106264 | Not Available | Positive | 3190593 - 3191411 | 30142.7 |
| methylmalonyl-coa epimerase | SAMN06295900_106265 | Not Available | Positive | 3191535 - 3191921 | 14474.3 |
| hypothetical protein | SAMN06295900_106266 | Not Available | Negative | 3191937 - 3192803 | 32028.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN06295900_106267 | Not Available | Negative | 3192890 - 3193687 | 29476.0 |
| d-alpha,beta-d-heptose 1,7-bisphosphate phosphatase | SAMN06295900_106268 | Not Available | Negative | 3193725 - 3194282 | 19774.8 |
| glycyl-trna synthetase beta chain | SAMN06295900_106269 | Not Available | Negative | 3194297 - 3196402 | 76144.8 |
| glycyl-trna synthetase alpha chain | SAMN06295900_106270 | Not Available | Negative | 3196420 - 3197427 | 38206.4 |
| apolipoprotein n-acyltransferase | SAMN06295900_106271 | Not Available | Negative | 3197601 - 3199274 | 59517.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.