Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa acyltransferase | SAMN06295900_106252 | Not Available | Positive | 3174153 - 3175352 | 41927.8 |
| enoyl-coa hydratase | SAMN06295900_106253 | Not Available | Positive | 3175439 - 3176209 | 27489.3 |
| fdhd protein | SAMN06295900_106254 | Not Available | Negative | 3176284 - 3177120 | 29903.6 |
| conserved hypothetical protein | SAMN06295900_106255 | Not Available | Positive | 3177292 - 3177768 | 18210.9 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN06295900_106256 | Not Available | Positive | 3178041 - 3181142 | 114685.0 |
| (3s)-malyl-coa thioesterase | SAMN06295900_106257 | Not Available | Negative | 3181175 - 3181567 | 14185.1 |
| atp-binding cassette, subfamily b | SAMN06295900_106258 | Not Available | Positive | 3181777 - 3183663 | 69239.1 |
| murnac alpha-1-phosphate uridylyltransferase | SAMN06295900_106259 | Not Available | Negative | 3183702 - 3184424 | 25642.8 |
| hypothetical protein | SAMN06295900_106260 | Not Available | Negative | 3184438 - 3185475 | 39374.2 |
| lps-assembly protein | SAMN06295900_106261 | Not Available | Positive | 3185671 - 3188037 | 86845.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.