Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiopurine s-methyltransferase (tpmt) | SAMN06295900_106242 | Not Available | Positive | 3162478 - 3163152 | 24747.5 |
| putative regulatory protein, fmdb family | SAMN06295900_106243 | Not Available | Positive | 3163287 - 3163637 | 11383.9 |
| uncharacterized membrane protein | SAMN06295900_106244 | Not Available | Positive | 3163775 - 3164425 | 23494.3 |
| aspartyl-trna synthetase | SAMN06295900_106245 | Not Available | Positive | 3164486 - 3166288 | 67822.3 |
| hypothetical protein | SAMN06295900_106246 | Not Available | Positive | 3166417 - 3166782 | 12872.5 |
| dihydroneopterin triphosphate pyrophosphatase | SAMN06295900_106247 | Not Available | Positive | 3166905 - 3167381 | 17851.3 |
| cardiolipin synthase | SAMN06295900_106248 | Not Available | Positive | 3167378 - 3168625 | 45895.3 |
| transcriptional regulator, tetr family | SAMN06295900_106249 | Not Available | Positive | 3168941 - 3169729 | 29130.4 |
| hypothetical protein | SAMN06295900_106250 | Not Available | Positive | 3169794 - 3171581 | 65134.4 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN06295900_106251 | Not Available | Positive | 3171689 - 3174127 | 87510.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.