Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acyl-d-amino-acid deacylase | SAMN06295900_106232 | Not Available | Positive | 3148765 - 3150246 | 52236.0 |
| 7-cyano-7-deazaguanine reductase | SAMN06295900_106233 | Not Available | Negative | 3150304 - 3151128 | 30672.4 |
| l-threonine ammonia-lyase | SAMN06295900_106234 | Not Available | Negative | 3151163 - 3152890 | 62797.7 |
| fe-s oxidoreductase | SAMN06295900_106235 | Not Available | Positive | 3153173 - 3157195 | 148872.0 |
| diadenosine tetraphosphate (ap4a) hydrolase | SAMN06295900_106236 | Not Available | Positive | 3157246 - 3157674 | 16151.2 |
| duf971 family protein | SAMN06295900_106237 | Not Available | Positive | 3157732 - 3158145 | 14965.6 |
| demethylmenaquinone methyltransferase /2-octaprenyl-6-methoxy-1,4-benzoquinone methylase | SAMN06295900_106238 | Not Available | Positive | 3158268 - 3158999 | 27186.9 |
| predicted lipid-binding transport protein, tim44 family | SAMN06295900_106239 | Not Available | Positive | 3159036 - 3160031 | 34981.7 |
| ubiquinone biosynthesis protein ubij | SAMN06295900_106240 | Not Available | Positive | 3160149 - 3160775 | 22331.7 |
| 2-octaprenylphenol hydroxylase | SAMN06295900_106241 | Not Available | Positive | 3160789 - 3162369 | 59870.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.