Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia caryophylli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Allium cepa, Dianthus caryophyllus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1147290 bp
Thymine Count
1160892 bp
Guanine Count
2143000 bp
Cytosine Count
2092206 bp
Genome Length
6543652 bp
Protein-coding Genes
5797 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfonate transport system permease protein | SAMN06295900_106222 | Not Available | Positive | 3139605 - 3140474 | 31626.8 |
| sulfonate transport system atp-binding protein | SAMN06295900_106223 | Not Available | Positive | 3140471 - 3141220 | 26784.7 |
| transglycosylase slt domain-containing protein | SAMN06295900_106224 | Not Available | Positive | 3141404 - 3141952 | 18399.9 |
| hypothetical protein | SAMN06295900_106225 | Not Available | Positive | 3142201 - 3142593 | 14120.8 |
| chrd domain-containing protein | SAMN06295900_106226 | Not Available | Positive | 3142702 - 3143139 | 15254.2 |
| acetyl esterase/lipase | SAMN06295900_106227 | Not Available | Positive | 3143305 - 3144276 | 34734.7 |
| ecsc protein family protein | SAMN06295900_106228 | Not Available | Negative | 3144243 - 3145076 | 29083.9 |
| drug resistance transporter, emrb/qaca subfamily | SAMN06295900_106229 | Not Available | Positive | 3145169 - 3146761 | 57088.4 |
| dna-binding transcriptional regulator, marr family | SAMN06295900_106230 | Not Available | Positive | 3146809 - 3147276 | 17021.4 |
| d-serine dehydratase | SAMN06295900_106231 | Not Available | Negative | 3147278 - 3148555 | 46380.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.